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Bioinformatics on a Heterogeneous Java Distributed System

Page, Andrew J. and Keane, Thomas M. and Naughton, Thomas J. (2005) Bioinformatics on a Heterogeneous Java Distributed System. .

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Abstract

A programmable Java distributed system, which utilises the free resources of a heterogeneous set of computers linked together by a network, has been developed. The system has been successfully deployed on over 200 computers, which were distributed over a number of locations, and has been successfully used to process bioinformatics, biomedical engineering, and cryptography applications. We present two bioinformatics applications, DSEARCH, which performs sensitive database and DPRml which performs distributed phylogeny reconstruction by maximum likelihood.

Keywords:java, bioinformatics, open source, hierarchical topology, dprml, dsearch, distributed computing
Subjects:Science & Engineering > Computer Science
ID Code:236
Deposited By:Andrew Page
Deposited On:18 Aug 2005
Publisher:IEEE Computer Society
Refereed:Yes

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